{
  "_id": "6a1d45d11d7bb097a0a42117",
  "Package": "GIFT",
  "Type": "Package",
  "Title": "Access to the Global Inventory of Floras and Traits (GIFT)",
  "Version": "1.3.3",
  "Authors@R": "c(\nperson(\"Pierre\", \"Denelle\", email = \"pierre.denelle@gmail.com\",\nrole = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-5037-2281\")),\nperson(\"Patrick\", \"Weigelt\", email = \"pweigel@uni-goettingen.de\",\nrole = c(\"aut\" ), comment = c(ORCID = \"0000-0002-2485-3708\"))\n)",
  "Description": "Retrieving regional plant checklists, species traits and\ndistributions, and environmental data from the Global Inventory\nof Floras and Traits (GIFT). More information about the GIFT\ndatabase can be found at <https://gift.uni-goettingen.de/about>\nand the map of available floras can be visualized at\n<https://gift.uni-goettingen.de/map>. The API and associated\nqueries can be accessed according the following scheme:\n<https://gift.uni-goettingen.de/api/extended/index2.0.php?query=env_raster>.",
  "License": "GPL (>= 2)",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "URL": "https://github.com/BioGeoMacro/GIFT,\nhttps://biogeomacro.github.io/GIFT/",
  "BugReports": "https://github.com/BioGeoMacro/GIFT/issues",
  "VignetteBuilder": "knitr",
  "Roxygen": "list(markdown = TRUE)",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibglpk-dev libicu-dev libxml2-dev libssl-dev libproj-dev\nlibsqlite3-dev libudunits2-dev",
  "Repository": "https://biogeomacro.r-universe.dev",
  "Date/Publication": "2026-03-31 07:25:04 UTC",
  "RemoteUrl": "https://github.com/biogeomacro/gift",
  "RemoteRef": "HEAD",
  "RemoteSha": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-01 08:36:10 UTC",
    "User": "root"
  },
  "Author": "Pierre Denelle [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-5037-2281>),\nPatrick Weigelt [aut] (ORCID: <https://orcid.org/0000-0002-2485-3708>)",
  "Maintainer": "Pierre Denelle <pierre.denelle@gmail.com>",
  "MD5sum": "7011f6283afeabbb84ef884dee1ef5d3",
  "_user": "biogeomacro",
  "_type": "src",
  "_file": "GIFT_1.3.3.tar.gz",
  "_fileid": "044a4d92c4d6554f9a1acd1d6d865738554bc985a4c12aa25178547c68be61f9",
  "_filesize": 5498182,
  "_sha256": "044a4d92c4d6554f9a1acd1d6d865738554bc985a4c12aa25178547c68be61f9",
  "_created": "2026-06-01T08:36:10.000Z",
  "_published": "2026-06-01T08:41:53.441Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78815407098,
      "time": 264,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7326997984"
    },
    {
      "job": 78815407092,
      "time": 255,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326995182"
    },
    {
      "job": 78815407089,
      "time": 237,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7326981417"
    },
    {
      "job": 78815407076,
      "time": 297,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326992345"
    },
    {
      "job": 78814784993,
      "time": 243,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326911107"
    },
    {
      "job": 78815407073,
      "time": 143,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326958959"
    },
    {
      "job": 78815407109,
      "time": 180,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7326971356"
    },
    {
      "job": 78815407088,
      "time": 187,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7326974213"
    },
    {
      "job": 78815407083,
      "time": 195,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7326975919"
    }
  ],
  "_buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/biogeomacro/gift",
  "_commit": {
    "id": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
    "author": "denelle <pierre.denelle@gmail.com>",
    "committer": "denelle <pierre.denelle@gmail.com>",
    "message": "Publication records updated\n",
    "time": 1774941904
  },
  "_maintainer": {
    "name": "Pierre Denelle",
    "email": "pierre.denelle@gmail.com",
    "login": "pierredenelle",
    "description": "",
    "uuid": 15929897,
    "orcid": "0000-0001-5037-2281"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.3",
      "role": "Depends"
    },
    {
      "package": "ape",
      "role": "Imports"
    },
    {
      "package": "curl",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "httr2",
      "role": "Imports"
    },
    {
      "package": "jsonlite",
      "role": "Imports"
    },
    {
      "package": "phytools",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "sf",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    },
    {
      "package": "kableExtra",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "patchwork",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "RColorBrewer",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "rnaturalearth",
      "role": "Suggests"
    },
    {
      "package": "rnaturalearthdata",
      "role": "Suggests"
    },
    {
      "package": "scales",
      "role": "Suggests"
    }
  ],
  "_owner": "biogeomacro",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-24",
      "n": 1
    },
    {
      "week": "2025-25",
      "n": 2
    },
    {
      "week": "2025-33",
      "n": 1
    },
    {
      "week": "2025-38",
      "n": 3
    },
    {
      "week": "2025-42",
      "n": 1
    },
    {
      "week": "2026-14",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "biodiversity",
    "biodiversity-informatics",
    "plants-database",
    "plants-distribution"
  ],
  "_stars": 19,
  "_contributors": [
    {
      "user": "pierredenelle",
      "count": 580,
      "uuid": 15929897
    },
    {
      "user": "patrickweigelt",
      "count": 198,
      "uuid": 23210487
    }
  ],
  "_userbio": {
    "uuid": 40601042,
    "type": "organization",
    "name": "BioGeoMacro"
  },
  "_downloads": {
    "count": 300,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/GIFT"
  },
  "_devurl": "https://github.com/biogeomacro/gift",
  "_pkgdown": "https://biogeomacro.github.io/GIFT/",
  "_searchresults": 39,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/GIFT.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/biogeomacro/gift",
  "_realowner": "biogeomacro",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2023-03-15"
    },
    {
      "version": "1.1.0",
      "date": "2023-06-20"
    },
    {
      "version": "1.2.0",
      "date": "2023-08-17"
    },
    {
      "version": "1.3.0",
      "date": "2023-11-20"
    },
    {
      "version": "1.3.1",
      "date": "2024-01-09"
    },
    {
      "version": "1.3.2",
      "date": "2024-02-27"
    },
    {
      "version": "1.3.3",
      "date": "2024-12-19"
    }
  ],
  "_exports": [
    "GIFT_checklists",
    "GIFT_checklists_conditional",
    "GIFT_checklists_raw",
    "GIFT_coverage",
    "GIFT_env",
    "GIFT_env_meta_misc",
    "GIFT_env_meta_raster",
    "GIFT_lists",
    "GIFT_no_overlap",
    "GIFT_overlap",
    "GIFT_phylogeny",
    "GIFT_references",
    "GIFT_regions",
    "GIFT_richness",
    "GIFT_shapes",
    "GIFT_spatial",
    "GIFT_species",
    "GIFT_species_distribution",
    "GIFT_species_lookup",
    "GIFT_taxgroup",
    "GIFT_taxonomy",
    "GIFT_traits",
    "GIFT_traits_meta",
    "GIFT_traits_raw",
    "GIFT_traits_tax",
    "GIFT_versions"
  ],
  "_datasets": [
    {
      "name": "western_mediterranean",
      "title": "Shape file of the western Mediterranean basin",
      "object": "western_mediterranean",
      "class": [
        "sf",
        "data.frame"
      ],
      "fields": [
        "IDforGIFT",
        "geometry"
      ],
      "rows": 1,
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "GIFT_checklists",
      "title": "GIFT checklists",
      "topics": [
        "GIFT_checklists"
      ]
    },
    {
      "page": "GIFT_checklists_conditional",
      "title": "GIFT checklists meta data",
      "topics": [
        "GIFT_checklists_conditional"
      ]
    },
    {
      "page": "GIFT_checklists_raw",
      "title": "GIFT checklists",
      "topics": [
        "GIFT_checklists_raw"
      ]
    },
    {
      "page": "GIFT_coverage",
      "title": "Taxonomic and trait coverage per geographic region and taxonomic group in GIFT",
      "topics": [
        "GIFT_coverage"
      ]
    },
    {
      "page": "GIFT_env",
      "title": "Environmental data for GIFT checklists",
      "topics": [
        "GIFT_env"
      ]
    },
    {
      "page": "GIFT_env_meta_misc",
      "title": "Metadata for the environmental miscellaneous variables in GIFT",
      "topics": [
        "GIFT_env_meta_misc"
      ]
    },
    {
      "page": "GIFT_env_meta_raster",
      "title": "Metadata for the environmental rasters in GIFT",
      "topics": [
        "GIFT_env_meta_raster"
      ]
    },
    {
      "page": "GIFT_lists",
      "title": "Metadata for checklists available in GIFT",
      "topics": [
        "GIFT_lists"
      ]
    },
    {
      "page": "GIFT_no_overlap",
      "title": "Select non-overlapping regions",
      "topics": [
        "GIFT_no_overlap"
      ]
    },
    {
      "page": "GIFT_overlap",
      "title": "Spatial overlap between GIFT polygons and external polygons",
      "topics": [
        "GIFT_overlap"
      ]
    },
    {
      "page": "GIFT_phylogeny",
      "title": "Phylogeny of the species in GIFT",
      "topics": [
        "GIFT_phylogeny"
      ]
    },
    {
      "page": "GIFT_references",
      "title": "Metadata for references available in GIFT",
      "topics": [
        "GIFT_references"
      ]
    },
    {
      "page": "GIFT_regions",
      "title": "Metadata for GIFT regions",
      "topics": [
        "GIFT_regions"
      ]
    },
    {
      "page": "GIFT_richness",
      "title": "Species richness per geographic region and taxonomic group in GIFT",
      "topics": [
        "GIFT_richness"
      ]
    },
    {
      "page": "GIFT_shapes",
      "title": "Shape files of GIFT regions",
      "topics": [
        "GIFT_shapes"
      ]
    },
    {
      "page": "GIFT_spatial",
      "title": "Spatial selection of GIFT checklists",
      "topics": [
        "GIFT_spatial"
      ]
    },
    {
      "page": "GIFT_species",
      "title": "Species list in GIFT",
      "topics": [
        "GIFT_species"
      ]
    },
    {
      "page": "GIFT_species_distribution",
      "title": "GIFT species distribution",
      "topics": [
        "GIFT_species_distribution"
      ]
    },
    {
      "page": "GIFT_species_lookup",
      "title": "Species list in GIFT",
      "topics": [
        "GIFT_species_lookup"
      ]
    },
    {
      "page": "GIFT_taxgroup",
      "title": "Taxonomic group of species",
      "topics": [
        "GIFT_taxgroup"
      ]
    },
    {
      "page": "GIFT_taxonomy",
      "title": "Taxonomy of GIFT",
      "topics": [
        "GIFT_taxonomy"
      ]
    },
    {
      "page": "GIFT_traits",
      "title": "Trait values at the species level",
      "topics": [
        "GIFT_traits"
      ]
    },
    {
      "page": "GIFT_traits_meta",
      "title": "Trait metadata",
      "topics": [
        "GIFT_traits_meta"
      ]
    },
    {
      "page": "GIFT_traits_raw",
      "title": "Raw trait values",
      "topics": [
        "GIFT_traits_raw"
      ]
    },
    {
      "page": "GIFT_traits_tax",
      "title": "Traits at the taxonomic level",
      "topics": [
        "GIFT_traits_tax"
      ]
    },
    {
      "page": "GIFT_versions",
      "title": "Versions of GIFT available",
      "topics": [
        "GIFT_versions"
      ]
    },
    {
      "page": "western_mediterranean",
      "title": "Shape file of the western Mediterranean basin",
      "topics": [
        "western_mediterranean"
      ]
    }
  ],
  "_pkglogo": "https://github.com/biogeomacro/gift/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/biogeomacro/gift/raw/HEAD/README.md",
  "_rundeps": [
    "ape",
    "askpass",
    "class",
    "classInt",
    "cli",
    "clusterGeneration",
    "coda",
    "codetools",
    "combinat",
    "cpp11",
    "curl",
    "DBI",
    "DEoptim",
    "digest",
    "doParallel",
    "dplyr",
    "e1071",
    "expm",
    "fastmatch",
    "foreach",
    "generics",
    "glue",
    "httr2",
    "igraph",
    "iterators",
    "jsonlite",
    "KernSmooth",
    "lattice",
    "lifecycle",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "mnormt",
    "nlme",
    "numDeriv",
    "openssl",
    "optimParallel",
    "phangorn",
    "phytools",
    "pillar",
    "pkgconfig",
    "proxy",
    "purrr",
    "quadprog",
    "R6",
    "rappdirs",
    "Rcpp",
    "rlang",
    "s2",
    "scatterplot3d",
    "sf",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "units",
    "utf8",
    "vctrs",
    "withr",
    "wk"
  ],
  "_vignettes": [
    {
      "source": "GIFT.Rmd",
      "filename": "GIFT.html",
      "title": "GIFT tutorial",
      "author": "Pierre Denelle & Patrick Weigelt",
      "engine": "knitr::rmarkdown",
      "headings": [
        "1. Checklists for a region",
        "1.1. Shapefile",
        "1.2. Main arguments",
        "1.3. GIFT_checklists()",
        "1.4. Species richness map",
        "Equator line",
        "Color code from Barthlott 2007",
        "2. Distribution of species",
        "2.1. Available species",
        "2.2. Species names and taxonomic harmonization",
        "2.3. Species distribution",
        "3.2. Trait values",
        "3.2.1. Species level",
        "3.2.2. Taxonomic level",
        "3.3. Trait coverage",
        "4. Environmental variables",
        "4.1. Metadata",
        "4.2. Environmental values",
        "4.3. Map",
        "5. Phylogeny",
        "6. References"
      ],
      "created": "2022-11-07 08:34:01",
      "modified": "2025-09-15 10:55:07",
      "commits": 36
    }
  ],
  "_score": 6.34693946269899,
  "_indexed": true,
  "_nocasepkg": "gift",
  "_universes": [
    "biogeomacro",
    "pierredenelle"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3.3",
      "date": "2026-06-01T08:38:53.000Z",
      "distro": "noble",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "71b17c24d2510be29ea3f46d47f8361d2eff3b0353d2437d42d4723c62866fb4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.3.3",
      "date": "2026-06-01T08:38:51.000Z",
      "distro": "noble",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "e90890df6c9c170adfb00feaf7d45d50218b0645e186a9ca559761dd31bfabd7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.3.3",
      "date": "2026-06-01T08:38:45.000Z",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "bb5e8b2e4e4a6dcff94af439d868db9483c5fb8bdb1a252d4febb191cc67ddd1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.3.3",
      "date": "2026-06-01T08:38:42.000Z",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "ac682512cf0e85faaf5ad0a41e90c5735e3fe5d0d17ede15fbcef56d10732f9a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.3.3",
      "date": "2026-06-01T08:38:53.000Z",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "c73fe685df06eab6f48b6b32d43a0a8967ff5ffbef5adff86da36ec377baf891",
      "status": "success",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.3.3",
      "date": "2026-06-01T08:37:53.000Z",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "15ec173a8cecef0ed6c03834699751de49f94834daf965fcfb34ea9914720970",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.3.3",
      "date": "2026-06-01T08:37:46.000Z",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "61151003f0dc8caf977e9621a86d5375d339ae73d0a0073214bf995168213d90",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.3.3",
      "date": "2026-06-01T08:37:38.000Z",
      "commit": "3e4b5e73db030e1c4c80a9234ee37cff5e3ed592",
      "fileid": "1e655fe62a5ff636a3c545d74b2dc13ba847ccdfa551245ac2a83dba871eea84",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/biogeomacro/actions/runs/26743991795"
    }
  ]
}